new: "Open infrastructures with open citations" https://chem-bla-ics.blogspot.com/2021/09/open-infrastructures-with-open-citations.html
Fwd: Scholarly journals should use "Archived on" instead of "Accessed on" https://chem-bla-ics.blogspot.com/2021/08/scholarly-journals-should-use-archived.html
new paper: "Ten simple rules for creating reusable pathway models for computational analysis and visualization" https://doi.org/10.1371/journal.pcbi.1009226 with blog at https://chem-bla-ics.blogspot.com/2021/08/new-ten-simple-rules-for-creating.html
I started distributing Springer Nature articles in XML form via GitHub. Read my progress in my blog: 1. https://chem-bla-ics.blogspot.com/2021/08/in-which-i-use-my-api-account-to.html 2. https://chem-bla-ics.blogspot.com/2021/08/from-journal-of-cheminformatics.html #openscience #github #springernature #xml #jats
Not every citation is equal. "Typed Citations in the Journal of Cheminformatics"
update on our CiTO work :) "Typed Citations in the Journal of Cheminformatics" https://blogs.biomedcentral.com/on-physicalsciences/2021/07/20/typed-citations-journal-of-cheminformatics/
second position in my group is now online! looking for someone to get serious with the @eNanoMapper ontology, working in/with/for the @NanoSolveIT and @nanocommons projects https://academictransfer.com/en/302634/phd-candidate-using-ontologies-to-build-a-knowledge-graph-for-molecular-interactions-of-nanoparticles-in-the-department-of-bioinformatics-school-nutrim-at-the-faculty-of-health-medicine-and-life-sciences/
we have a postdoc position to integrate biological, chemical, and toxicology resources with Docker, OpenAPI, to build a virtual human: https://academictransfer.com/en/302534/postdoctoral-researcher-in-bioinformaticscheminformatics-using-openapi-fair-and-docker-for-predictive-toxicology-and-risk-assessment-10-fte-faculty-of-health-medicine-and-life-sciencesschool-nutrimdepartment-of-bioinformatics-bigcat/
In a fascinating blog post, Cook enumerates all of the FLICC subtechniques, describing their relationship to the Big Five FLICC tactics, along with great, vector-based icons licensed CC BY-SA.
Here's the full taxonomy:
Open call for participation for the 15th Berlin Open Access Conference (B15): Adapt and Advance.
@tuxom The IPCC writes: "Human activities are estimated to have caused approximately 1.0°C of global warming above pre-industrial levels, with a likely range of 0.8°C to 1.2°C. Global warming is likely to reach 1.5°C between 2030 and 2052 if it continues to increase at the current rate. (high confidence)"
The IF is important. What we do in the mean time matters. My blog post: https://variable-variability.blogspot.com/2018/12/no-we-do-not-have-only-12-years-to-stop-climate-change.html
The IPCC wrote an entire report on this and related questions. https://www.ipcc.ch/sr15/
Fwd: "Thank you. Let's be the future." https://chem-bla-ics.blogspot.com/2021/06/thank-you-lets-be-future.html
Kostas Glinos's ELIXIR All Hands keynote: "Driving the paradigm shift towards Open Science"
Slide 26 is interesting, in the next EU science funding program not only data, but also
"digital: Software, algorithms, protocols, workflows, models, and
physical: reagents, antibodies, hardware, etc.
all need to be properly managed". Properly means a "data" management plan, open access and FAIR.
Springer funded a project to spot nonsensical computed generated (SCIgen) papers, which resulted in free software called SciDetect. They found 243 articles created entirely or partly by SCIgen. 46 had already been retracted or deleted.
Here is a query for the *Number* of #Mastodon accounts mentioned in #Wikidata
Currently there are 397. And the number is rising ↗️
Maybe a visualization🖼️ of that number over time would be nice.
Egon Willighagen is stepping down as Editor-in-Chief of the Journal of #Cheminformatics. The journal now being part of Springer Nature no longer allows for running the journal in the spirit of #OpenScience.
Cita is a Wikidata addon for Zotero that adds citations from Wikidata, and enables users to easily contribute missing data.
@VictorVenema, I will not post this myself on reddit openscience, but I think you will find it interesting: https://chem-bla-ics.blogspot.com/2021/06/conflict-of-interest-or-why-i-am.html
Chem/Bio/Stats/SemWeb, @the_cdk, @wikipathways, @jcheminf, @bigcat_um, @MaastrichtU (these tweets are personal)
Scholar Social is a microblogging platform for researchers, grad students, librarians, archivists, undergrads, academically inclined high schoolers, educators of all levels, journal editors, research assistants, professors, administrators—anyone involved in academia who is willing to engage with others respectfully.